人类免疫缺陷病毒潜伏库定量检测技术的研究进展

以静息CD4~+T细胞为主的人类免疫缺陷病毒(human immunodeficiency virus,HIV)潜伏库的清除已成为治愈HIV-1感染的主要障碍,人们迫切需要建立一种高通量、可靠的、高灵敏度的方法来定量检测病毒潜伏库的真实大小。本文就目前关于HIV潜伏库的多种定量检测方法进行综述。     

Monthly change of community structure of zoobenthos in Xiangxi Bay after impoundment of the Three Gorges Teservoir, China

Xiangxi Bay, a typical bay of the Three Gorges Reservoir (TGR) in China, was formed in June 2003 after the impoundment of the TGR. We investigated the community structure of zoobenthos in Xiangxi Bay from August 2003 to August 2004. Benthic abundance and biomass were calculated per unit area of sediment. A total of 26 taxa were identified. They included two families of Lamellibranchia (7.7% of the total taxa number), two families of Oligochaeta (50%), Chironomidae (38.5%), and one other animal (3.8%). The average density and biomass were 276 ind./m² and 0.301 g/m², respectively. Oligochaetes and chironomids constituted the major groups, and Limnodrilus hoffmeisteri, Procladius sp., Branchiura sowerbyi, Tubificidae sp1. and Polypedilum scalaenum group sp. were the common taxa in this reservoir system. Among them, L. hoffmeisteri and Procladius sp. were the dominant species, and contributed 37.0% and 28.3% of the total density, respectively. The standing crop of zoobenthos in Xiangxi Bay was relative low, compared with other similar reservoirs. Our studies demonstrate that the standing crop increased gradually with time. The total density and biomass in August 2004 were 8.8 and 14.3 times those of the initial impoundment, separately. Oligochaetes did not become the sole dominant group, indicating that the sediment loading in Xiangxi Bay may be not serious. __________ Translated from Acta Hydrobiologica Sinica, 2006, 30(1): 64–69 [译自: 水生生物学报]     

Population genetics of invasive common carp Cyprinus carpio L. in coastal drainages in eastern Australia

The common carp Cyprinus carpio introduced in two drainages in eastern Australia are largely descended from European common carp, and in a third drainage they descend largely from East Asian common carp. The partial genetic differentiation among the species in those drainages is consistent with their origins.     

6000 years of environmental changes recorded in Blue Lake, South Australia, based on ostracod ecology and valve chemistry

A 4 m long core taken from the freshwater Blue Lake crater near the township of Mount Gambier in southeastern South Australia provided a high-resolution palaeoclimatic record for the last six millennia. Accelerator Mass Spectrometry (AMS) radiocarbon (¹⁴C) dates were obtained from organic plant fibres and biogenic carbonates from the laminated sequence of the core and from a modern water sample. Large discrepancies between the radiocarbon ages determined from plant fibres and biogenic carbonates indicate the presence of a time-variable lacustrine reservoir, which is consistent with what is known of the lake's hydrology.Ostracod assemblages, associated with stable isotope (δ¹³C, δ¹⁸O) analyses and, in combination with Mg/Ca, Sr/Ca and Na/Ca analyses done on ostracod valves, infer salinity, temperature and water level changes in Blue Lake over the last 6 millenia. The influence of local aquifers through time has also been determined from the Na/Ca of ostracod valves. Approximately 900 year cycles are evident in the δ¹³C record from 5.4 ka to 1.8 ka.The history of Blue Lake records an initial period of high hydrological variability around 6 ka, becoming increasingly deeper as groundwater flowed into the basin. By 4 ka, the lake had reached steady state with the lake level fluctuating by as much as 9 m, although significant geochemical variations represent temperature fluctuations until European settlement near the lake in 1839.     

Impact of flood on distribution of bathypelagic perch fry layer along the longitudinal profile of large canyon-shaped reservoir

Previous studies have shown that under normal spring conditions, the layer of bathypelagic perch Perca fluviatilis fry (BPF) is equally distributed along most of the longitudinal profile of reservoirs. In the first half of June 2004, local flooding entering the large canyon‐shaped Orlík Reservoir (Czech Republic) completely flushed out the existing fry community from the 31 km long riverine part of the reservoir. The pelagic zone in this reach was then recolonized by cyprinid (mainly roach Rutilus rutilus and bream Abramis brama) fry being of either littoral or riverine origin. Subsequently, the BPF layer was recorded only in the 22 km long lacustrine part of the reservoir. In the upper reach of this part where, due to the sudden increase in volume, the water current slowed down rapidly and fry originating from both riverine and central parts of the reservoir gathered in high numbers, two distinct BPF layers were observed. During mid‐day, the upper BPF layer, created predominantly by shoaling fishes (abundance >126 000 individuals ha^?1), occurred between 6 and 10 m. A second, lower BPF layer, created by non‐shoaling fishes exclusively (30 000 individuals ha^?1), was recorded between 12 and 17 m depth. Both upper and lower BPF layer were composed of perch (69·6 and 66·8% in abundance respectively) and zander Sander lucioperca (29·8 and 28·6% in abundance respectively). In the lower BPF layer, ruffe Gymnocephalus cernuus also contributed considerably to the fry assemblage (4·0% in abundance). Perch from the upper BPF layer (mean 25·1 mm total length, L_T) did not differ in size from perch from the lower BPF layer (mean 25·0 mm L_T). Similarly, zander from the upper BPF layer (mean 27·2 mm L_T) were almost the same size as those from the lower BPF layer (mean 26·9 mm L_T). Perch from both BPF layers, however, were noticeably smaller than zander. The results from acoustic survey and complementary net catches suggest that no epipelagic perch fry were found in the reservoir where thermal stratification had been destroyed by flooding and windy weather.     

山美水库两种入侵罗非鱼繁殖生物学比较

为比较山美水库两种入侵齐氏罗非鱼(Coptodon zillii)和伽利略罗非鱼(Sarotherodon galilaeus)种群的繁殖生物学特征,于2021年3—10月份在山美水库逐月采样,分析了繁殖时间、性比、绝对繁殖力、相对繁殖力和成熟卵径等特征。结果表明,两种罗非鱼均于4月份开始繁殖,齐氏罗非鱼繁殖高峰为7月, 10月结束繁殖;伽利略罗非鱼繁殖高峰为6月, 9月结束繁殖。齐氏罗非鱼平均绝对繁殖力为(4009.85±1305.69)粒、平均体重相对繁殖力为(67.32±15.63)粒/g、平均体长相对繁殖力为(31.31±5.03)粒/mm;伽利略罗非鱼平均绝对繁殖力为(1701.85±591.29)粒、平均体重相对繁殖力为(6.46±0.87)粒/g、平均体长相对繁殖力为(8.22±2.33)粒/mm;齐氏罗非鱼的绝对繁殖力、体重相对繁殖力和体长相对繁殖力均显著高于伽利略罗非鱼,平均成熟卵径则显著小于伽利略罗非鱼。齐氏罗非鱼和伽利略罗非鱼繁殖群体的雌雄性比分别为1.59和1.83,两个种群的雌雄性比无显著差异,但均显著偏离1﹕1。研究表明两种共同入侵的罗非鱼种群具有不同的繁殖...     

Significance of temporal changes when designing a reservoir for conservation of dragonfly diversity

While there has been much focus in biodiversity conservation that transcends place, few studies transcend time. Yet an appreciation of vegetational and hydrological succession is essential for maintaining a habitat that has been created with the aim of conserving a particular group of organisms. This is a study of changes in a dragonfly assemblage over a period of 13 years at a biodiversity-rich, southern hemisphere reservoir. A total of 30 dragonfly species were recorded in this study, compared to 12 species before the reservoir was constructed in 1988, and 26 species in 1993, with 25 species resident in both 1993 and 2001. Two of these are local endemics. One other endemic was lost to succession in 1993 but reappeared in 2001. Three other species never reappeared after succession in 1993, yet six other species appeared after this date. Multivariate analyses identified structural and compositional vegetation, especially marginal forest, percentage vegetation cover, percentage shade, as the most important environmental variables determining dragonfly species composition. Other important environmental variables were grasses of tall, medium and short height categories, submerged vegetation, water flow and amount of open water. Not surprisingly, successional changes in vegetation physiognomy and in water conditions significantly increased Odonata species richness and diversity over the years. More importantly, the study shows that to maintain both high species richness, including endemics, it is essential to maintain a variety of biotopes using selective management of the marginal vegetation without allowing succession to proceed to a point where overgrowth of the bank and silting of the bottom begin to impoverish the fauna.     

Trypanosoma cruzi: distinct patterns of infection in the sibling caviomorph rodent species Thrichomys apereoides laurentius and Thrichomys pachyurus (Rodentia, Echimyidae)

Thrichomys apereoides, a caviomorph rodent species common in a highly endemic area for Chagas disease in Brazil, may act as reservoir of the parasite. However, no information is available concerning its sibling species Thrichomys pachyurus, found in the Pantanal region, where Trypanosoma cruzi is found only in the enzootic cycle. We followed up the cross infection of these cryptic species with two isolates derived from naturally infected T. pachyurus and Thrichomys apereoides laurentius. No regional co-adaptation between Thrichomys species and the regional isolates were noticed. However, significant differences in the outcome of the infection were observed. T. a. laurentius was more resistant than T. pachyurus, as expressed by lower parasitemia and less histopathological damage. The routine biochemical markers used for laboratory rodents were unsuitable for follow up of infection in Thrichomys spp, since they did not correlate with the histopathological findings or allowed the kinetic follow-up of tissue colonization by the parasite.     

Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of fluorescence in situ hybridization

A modified fluorescence in situ hybridization (FISH) method was used to analyze bacterial prey composition in protistan food vacuoles in both laboratory and natural populations. Under laboratory conditions, we exposed two bacterial strains (affiliated with beta- and gamma-Proteobacteria -- Aeromonas hydrophila and Pseudomonas fluorescens, respectively) to grazing by three protists: the flagellates Bodo saltans and Goniomonas sp., and the ciliate Cyclidium glaucoma. Both flagellate species preferably ingested A. hydrophila over P. fluorescens, while C. glaucoma showed no clear preferences. Differences were found in the digestion of bacterial prey with B. saltans digesting significantly faster P. fluorescens compared to two other protists. The field study was conducted in a reservoir as part of a larger experiment. We monitored changes in the bacterial prey composition available compared to the bacteria ingested in flagellate food vacuoles. Bacteria detected by probe HGC69a (Actinobacteria) and R-BT065 were negatively selected by flagellates. Bacteria detected by probe CF319a were initially positively selected but along with a temporal shift in bacterial cell size, this trend changed to negative selection during the experiment. Overall, our analysis of protistan food vacuole content indicated marked effects of flagellate prey selectivity on bacterioplankton community composition.     

丹江库区晚新生代三种兔形类化石

记述了丹江库区周围发现的三种兔形类化石：产在丹江二级阶地基座岩层中的淅川跳兔（新种）Alloptoxxichuanwnsissp．nov．个体小,形态较早中新世中期的A．minor原始,其时代可能是早中新世早期,同时详细讨论了Alloptox的进化和分类;发现于台子山林场裂隙堆积物中的进步上新五褶兔（新种）Pliopentalagusprogressivussp.nov.个体为该属已知各种中最大者,形态较已知种更接近于现生的Pentalagus,它的时代可能为上新世末或更新世初;产于郧县曲远河口汉水Ⅳ级阶地的复齿拟鼠兔Ochotonoidescomplicidens与蓝田金丝猴发现于同一阶地,推测其时代为早更新世晚期。